SNP Report

Basic Infomation

Name	rs16884021 dbSNP
Location	chr:6,20634615
Allele	G/A

LD-proxy of rSNPs(r²>0.8) (count: 29)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10456232	0.87[CEU][hapmap]
rs10456233	0.85[CEU][hapmap]
rs11970626	0.87[CEU][hapmap]
rs12153939	0.85[CEU][hapmap]
rs12194705	0.88[CEU][hapmap]
rs12204865	0.85[CEU][hapmap]
rs12207923	0.88[CEU][hapmap]
rs12214549	0.88[CEU][hapmap]
rs16884070	0.88[EUR][1000 genomes]
rs17226450	0.85[CEU][hapmap]
rs17823127	0.94[EUR][1000 genomes]
rs17823571	0.85[CEU][hapmap];0.88[EUR][1000 genomes]
rs17824302	0.85[EUR][1000 genomes]
rs2069013	1.00[CEU][hapmap];0.88[EUR][1000 genomes]
rs2069014	1.00[CEU][hapmap];0.88[EUR][1000 genomes]
rs62397569	0.94[EUR][1000 genomes]
rs62397571	1.00[EUR][1000 genomes]
rs62397572	1.00[EUR][1000 genomes]
rs62397573	0.97[EUR][1000 genomes]
rs62397574	0.97[EUR][1000 genomes]
rs62397614	0.88[EUR][1000 genomes]
rs62397617	0.88[EUR][1000 genomes]
rs62397618	0.88[EUR][1000 genomes]
rs62397619	0.88[EUR][1000 genomes]
rs62397620	0.88[EUR][1000 genomes]
rs62397621	0.83[EUR][1000 genomes]
rs62397622	0.88[EUR][1000 genomes]
rs62397624	0.85[EUR][1000 genomes]
rs62397647	0.82[EUR][1000 genomes]

rSNP related genes

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)