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rVarBase
SNP Report
Basic Infomation
Name
rs1492318  
dbSNP
Location
chr:12,40918031
Allele
C/A
LD-proxy of rSNPs(r
2
>0.8) (count: 9)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs10878731
0.94[CHB][hapmap];1.00[JPT][hapmap];0.99[ASN][1000 genomes]
rs1492319
0.94[CHB][hapmap];1.00[JPT][hapmap];0.99[ASN][1000 genomes]
rs17462055
0.84[YRI][hapmap]
rs1820546
0.83[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs1820547
0.85[AMR][1000 genomes];0.80[ASN][1000 genomes]
rs2588399
0.90[JPT][hapmap]
rs2920820
0.82[JPT][hapmap]
rs2920821
0.90[JPT][hapmap]
rs2933352
0.90[JPT][hapmap]
rSNP related genes
Symbol
Regulation type
MUC19
Proximal transcriptional regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)