SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 20)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10203477	1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs1053862	1.00[JPT][hapmap]
rs11125859	1.00[JPT][hapmap]
rs13019590	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs13026755	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs13031237	1.00[CHB][hapmap];1.00[CHD][hapmap];0.83[GIH][hapmap];1.00[JPT][hapmap];0.88[ASN][1000 genomes]
rs13031721	0.81[ASN][1000 genomes]
rs34493725	0.81[ASN][1000 genomes]
rs34695944	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs5013203	0.85[CEU][hapmap];1.00[JPT][hapmap];0.97[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55708439	0.81[ASN][1000 genomes]
rs62149416	1.00[ASN][1000 genomes]
rs62149417	1.00[ASN][1000 genomes]
rs62149419	1.00[ASN][1000 genomes]
rs6545832	0.85[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs66609926	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6706689	1.00[JPT][hapmap]
rs67574266	1.00[ASN][1000 genomes]
rs71398604	1.00[ASN][1000 genomes]
rs72807470	1.00[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
ENSG00000228414	Distal transcriptional regulation
REL	Distal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 0)