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rVarBase
SNP Report
Basic Infomation
Name
rs13045771  
dbSNP
Location
chr:20,44780406
Allele
G/A
LD-proxy of rSNPs(r
2
>0.8) (count: 12)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs16991114
0.94[GIH][hapmap]
rs2064405
0.94[GIH][hapmap]
rs2425761
1.00[JPT][hapmap]
rs2425769
1.00[JPT][hapmap]
rs2425770
1.00[JPT][hapmap]
rs35922919
0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4142256
1.00[ASN][1000 genomes]
rs57403739
1.00[ASN][1000 genomes]
rs6017746
1.00[JPT][hapmap]
rs60371250
1.00[ASN][1000 genomes]
rs6074041
1.00[JPT][hapmap]
rs6074043
1.00[JPT][hapmap]
rSNP related genes
Symbol
Regulation type
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 1)
eQTL related gene
Source
SPATA20
SCAN