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rVarBase
SNP Report
Basic Infomation
Name
rs12481282  
dbSNP
Location
chr:20,44761377
Allele
G/C
LD-proxy of rSNPs(r
2
>0.8) (count: 13)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs12480534
1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12625346
0.80[ASN][1000 genomes]
rs2143698
0.84[ASN][1000 genomes]
rs2143699
0.84[ASN][1000 genomes]
rs35296663
0.84[ASN][1000 genomes]
rs3746821
0.84[ASN][1000 genomes]
rs3765456
0.84[ASN][1000 genomes]
rs4810486
0.81[ASN][1000 genomes]
rs4813001
0.86[ASN][1000 genomes]
rs4813002
0.86[ASN][1000 genomes]
rs4813003
0.86[ASN][1000 genomes]
rs57147349
0.84[ASN][1000 genomes]
rs66815221
0.82[ASN][1000 genomes]
rSNP related genes
Symbol
Regulation type
CDH22
Distal transcriptional regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)