SNP Report
Name | rs12432546   dbSNP |
---|---|
Location | chr:14,68124334 |
Allele | C/T |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs10483802 | 0.99[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs12100925 | 0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs12431676 | 0.87[AFR][1000 genomes];0.81[AMR][1000 genomes] |
rs12434923 | 0.85[AMR][1000 genomes];0.97[ASN][1000 genomes] |
rs12435352 | 0.90[AFR][1000 genomes];0.85[AMR][1000 genomes];0.97[ASN][1000 genomes] |
rs12435531 | 0.93[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs12435927 | 0.87[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs12436474 | 0.82[EUR][1000 genomes];0.83[ASN][1000 genomes] |
rs12437263 | 0.80[AMR][1000 genomes];0.96[ASN][1000 genomes] |
rs12590038 | 0.80[AMR][1000 genomes];0.96[ASN][1000 genomes] |
rs12590620 | 0.80[ASN][1000 genomes] |
rs15493 | 0.99[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs17249444 | 0.81[ASN][1000 genomes] |
rs17249563 | 0.80[AFR][1000 genomes];0.98[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs1804799 | 0.87[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes] |
rs2009590 | 0.89[AFR][1000 genomes];0.81[AMR][1000 genomes];0.96[ASN][1000 genomes] |
rs3759768 | 0.89[AMR][1000 genomes];0.88[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs56981676 | 0.80[ASN][1000 genomes] |
rs59421018 | 0.99[AFR][1000 genomes];0.98[AMR][1000 genomes];0.91[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs60851053 | 0.96[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes] |
rs8010798 | 0.99[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes] |
rs8013234 | 0.80[AMR][1000 genomes];0.82[EUR][1000 genomes] |
rs910315 | 0.81[AMR][1000 genomes];0.96[ASN][1000 genomes] |
Symbol | Regulation type |
---|---|
RNA5SP386 | Proximal transcriptional regulation |
VTI1B | Distal transcriptional regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014