SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 5)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10897489	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs3782101	0.92[YRI][hapmap]
rs620690	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs621941	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6591843	0.88[ASW][hapmap];0.89[CEU][hapmap];0.86[CHB][hapmap];0.91[CHD][hapmap];0.93[GIH][hapmap];0.88[MEX][hapmap];0.85[MKK][hapmap];0.87[TSI][hapmap];0.92[YRI][hapmap];0.85[AFR][1000 genomes];0.85[AMR][1000 genomes];0.84[EUR][1000 genomes];0.85[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
RPS6KA4	Distal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 6)