SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 9)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10897477	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11231706	0.86[EUR][1000 genomes]
rs17158870	0.89[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs2286612	0.87[AFR][1000 genomes]
rs61629200	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7102415	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs7123004	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7934801	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7950596	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes]

rSNP related genes

Symbol	Regulation type
NUDT22	Proximal transcriptional regulation
STIP1	Distal transcriptional regulation
FERMT3	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)