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rVarBase
SNP Report
Basic Infomation
Name
rs11574026  
dbSNP
Location
chr:12,48288246
Allele
G/A
LD-proxy of rSNPs(r
2
>0.8) (count: 8)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs10128967
1.00[CHB][hapmap]
rs10875718
1.00[CHB][hapmap]
rs10875719
1.00[CHB][hapmap]
rs12297820
1.00[CHB][hapmap]
rs12301562
1.00[CHB][hapmap]
rs17882106
1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs7136534
0.82[ASW][hapmap]
rs7959510
1.00[CHB][hapmap]
rSNP related genes
Symbol
Regulation type
VDR
RNA binding protein mediated regulation
ENSG00000205537
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 1)
eQTL related gene
Source
UHRF1BP1L
SCAN