SNP Report
Basic Infomation
| Name | rs11564123 dbSNP |
|---|---|
| Location | chr:12,40492909 |
| Allele | C/G |
LD-proxy of rSNPs(r2>0.8) (count: 34)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs10506143 | 1.00[JPT][hapmap] |
| rs10506144 | 1.00[JPT][hapmap] |
| rs10506146 | 1.00[JPT][hapmap] |
| rs10878244 | 1.00[JPT][hapmap] |
| rs11174697 | 1.00[JPT][hapmap] |
| rs11175186 | 1.00[JPT][hapmap] |
| rs11564108 | 1.00[JPT][hapmap] |
| rs11564131 | 1.00[JPT][hapmap] |
| rs11564152 | 1.00[JPT][hapmap] |
| rs11564153 | 1.00[JPT][hapmap] |
| rs11564187 | 1.00[JPT][hapmap] |
| rs11564196 | 1.00[JPT][hapmap];1.00[EUR][1000 genomes] |
| rs11564210 | 1.00[JPT][hapmap] |
| rs11564216 | 1.00[JPT][hapmap] |
| rs11564218 | 1.00[JPT][hapmap] |
| rs11564271 | 1.00[JPT][hapmap] |
| rs12422544 | 1.00[JPT][hapmap] |
| rs12422796 | 1.00[JPT][hapmap] |
| rs12423551 | 1.00[JPT][hapmap] |
| rs12424294 | 1.00[JPT][hapmap] |
| rs12425561 | 1.00[JPT][hapmap] |
| rs12426378 | 1.00[JPT][hapmap] |
| rs12427022 | 1.00[JPT][hapmap] |
| rs1388585 | 1.00[JPT][hapmap] |
| rs1388597 | 1.00[JPT][hapmap] |
| rs1463717 | 1.00[JPT][hapmap] |
| rs17443600 | 1.00[JPT][hapmap] |
| rs17484141 | 1.00[JPT][hapmap] |
| rs2131081 | 1.00[JPT][hapmap] |
| rs28365169 | 1.00[JPT][hapmap] |
| rs28365686 | 1.00[EUR][1000 genomes] |
| rs4628750 | 1.00[JPT][hapmap] |
| rs4768213 | 1.00[JPT][hapmap] |
| rs4768226 | 1.00[JPT][hapmap] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| SLC2A13 | Distal transcriptional regulation |
| LRRK2 | Distal transcriptional regulation |
| MUC19 | Distal transcriptional regulation |
| SLC2A13 | RNA binding protein mediated regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014