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rVarBase
SNP Report
Basic Infomation
Name
rs28365686  
dbSNP
Location
chr:12,40455590
Allele
G/A
LD-proxy of rSNPs(r
2
>0.8) (count: 9)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs10878050
0.89[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs11564123
1.00[EUR][1000 genomes]
rs11564196
1.00[EUR][1000 genomes]
rs11564222
1.00[CEU][hapmap]
rs2708405
1.00[CEU][hapmap]
rs2723273
1.00[CEU][hapmap]
rs28365202
1.00[AFR][1000 genomes]
rs28370692
1.00[CEU][hapmap]
rs28370827
1.00[YRI][hapmap]
rSNP related genes
Symbol
Regulation type
RPL30P13
Distal transcriptional regulation
SLC2A13
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)