SNP Report

Basic Infomation

Name	rs1152226 dbSNP
Location	chr:11,64079609
Allele	T/C

LD-proxy of rSNPs(r²>0.8) (count: 28)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs1318165	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs2510067	0.80[AFR][1000 genomes]
rs477074	0.80[AFR][1000 genomes]
rs477909	0.83[AMR][1000 genomes]
rs483515	0.83[AMR][1000 genomes]
rs484384	0.83[AMR][1000 genomes]
rs488760	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs494403	0.83[AMR][1000 genomes]
rs512372	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs513264	0.83[AMR][1000 genomes]
rs545916	0.83[AMR][1000 genomes]
rs550819	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs558105	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs558864	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs564687	0.83[AMR][1000 genomes]
rs565221	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs566049	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs571379	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs594241	0.86[AFR][1000 genomes]
rs601845	0.83[AMR][1000 genomes]
rs614047	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs648220	0.83[AMR][1000 genomes]
rs649463	0.83[AMR][1000 genomes]
rs652611	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs676931	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs681797	0.83[AMR][1000 genomes]
rs687735	0.83[AFR][1000 genomes]
rs7941847	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]

rSNP related genes

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)