SNP Report

Basic Infomation

Name	rs11242109 dbSNP
Location	chr:5,131677047
Allele	G/T

LD-proxy of rSNPs(r²>0.8) (count: 19)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10060615	0.88[EUR][1000 genomes]
rs10075801	0.92[EUR][1000 genomes]
rs10479000	0.85[EUR][1000 genomes]
rs11950562	0.88[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs13357280	0.85[EUR][1000 genomes]
rs17622208	0.89[EUR][1000 genomes]
rs200838	0.91[EUR][1000 genomes]
rs2089855	0.80[EUR][1000 genomes]
rs2631360	0.91[EUR][1000 genomes]
rs2631367	0.90[EUR][1000 genomes]
rs4705849	0.81[EUR][1000 genomes]
rs4705926	0.81[EUR][1000 genomes]
rs4705938	0.80[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs72793278	0.81[EUR][1000 genomes]
rs72795121	0.96[EUR][1000 genomes]
rs7701414	0.80[EUR][1000 genomes]
rs7705189	0.84[EUR][1000 genomes]
rs7720230	0.80[EUR][1000 genomes]
rs7735891	0.85[EUR][1000 genomes]

rSNP related genes

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)