SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 11)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10792429	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs11231745	0.85[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2244621	0.80[ASN][1000 genomes]
rs34499953	0.85[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs3903175	0.90[EUR][1000 genomes]
rs4930702	0.98[AFR][1000 genomes];0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7107446	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs73502335	0.85[AFR][1000 genomes]
rs953778	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs9988817	0.86[AFR][1000 genomes];0.88[AMR][1000 genomes];0.81[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9988874	0.83[AFR][1000 genomes];0.87[AMR][1000 genomes];0.90[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
CCDC88B	Distal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 0)