SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 13)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11231699	0.84[CHD][hapmap];0.95[JPT][hapmap];1.00[MEX][hapmap];1.00[AFR][1000 genomes]
rs11231745	0.91[CHB][hapmap];0.87[JPT][hapmap]
rs2244621	0.91[CHB][hapmap];0.93[CHD][hapmap];0.87[JPT][hapmap]
rs2302263	0.91[CHB][hapmap];0.83[JPT][hapmap]
rs28395877	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs34499953	0.91[CHB][hapmap];0.91[CHD][hapmap];0.87[JPT][hapmap];0.81[ASN][1000 genomes]
rs3751117	1.00[JPT][hapmap];1.00[AFR][1000 genomes]
rs3751121	1.00[AFR][1000 genomes]
rs3751122	0.86[CHD][hapmap];0.91[JPT][hapmap]
rs4930702	0.91[CHB][hapmap];0.84[CHD][hapmap];0.82[JPT][hapmap]
rs633561	1.00[CEU][hapmap];1.00[GIH][hapmap]
rs73502335	0.84[ASN][1000 genomes]
rs953778	0.91[CHB][hapmap];0.90[JPT][hapmap]

rSNP related genes

Symbol	Regulation type
BAD	Proximal transcriptional regulation
GPR137	Proximal transcriptional regulation
ESRRA	Distal transcriptional regulation
TRMT112	Distal transcriptional regulation
PRDX5	Distal transcriptional regulation
GPR137	Distal transcriptional regulation
BAD	Distal transcriptional regulation
KCNK4	Distal transcriptional regulation
ENSG00000207024	Distal transcriptional regulation
TEX40	Distal transcriptional regulation
BAD	RNA binding protein mediated regulation
GPR137	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 0)