SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 31)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10788625	0.81[ASN][1000 genomes]
rs10788626	0.82[EUR][1000 genomes]
rs10788627	0.82[EUR][1000 genomes]
rs10788630	0.89[EUR][1000 genomes]
rs10788631	0.89[EUR][1000 genomes]
rs10887880	0.89[EUR][1000 genomes]
rs10887881	0.90[EUR][1000 genomes]
rs10887884	0.91[EUR][1000 genomes]
rs10887890	0.89[EUR][1000 genomes]
rs10887898	0.81[AMR][1000 genomes];0.87[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11202923	0.82[EUR][1000 genomes]
rs11202930	0.88[EUR][1000 genomes]
rs11202934	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs11202935	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs11202936	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12220642	0.91[ASN][1000 genomes]
rs12220655	0.91[ASN][1000 genomes]
rs1870145	0.94[AFR][1000 genomes];0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1902661	0.91[ASN][1000 genomes]
rs4934165	0.82[EUR][1000 genomes]
rs4934167	0.83[EUR][1000 genomes]
rs4934168	0.83[EUR][1000 genomes]
rs4934170	0.89[EUR][1000 genomes]
rs4934192	0.84[AMR][1000 genomes];0.85[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs55823231	0.89[EUR][1000 genomes]
rs59028692	0.89[EUR][1000 genomes]
rs59643748	0.89[EUR][1000 genomes]
rs7086496	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7895779	0.82[EUR][1000 genomes]
rs7917136	0.82[EUR][1000 genomes]
rs7917145	0.82[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
TSPAN14	Distal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 0)