SNP Report

Basic Infomation

Name	rs11174813 dbSNP
Location	chr:12,40425200
Allele	T/C

LD-proxy of rSNPs(r²>0.8) (count: 30)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10784338	0.89[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10784353	0.85[ASN][1000 genomes]
rs10784356	0.83[ASN][1000 genomes]
rs10784359	0.95[ASN][1000 genomes]
rs10877990	0.85[ASN][1000 genomes]
rs10878031	0.85[ASN][1000 genomes]
rs10878049	0.95[ASN][1000 genomes]
rs10878089	0.81[AFR][1000 genomes];0.89[ASN][1000 genomes]
rs11174702	0.95[AFR][1000 genomes];0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11174809	1.00[AFR][1000 genomes];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11174812	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11175024	0.81[AFR][1000 genomes];0.89[ASN][1000 genomes]
rs12813098	0.91[ASN][1000 genomes]
rs12823555	0.81[AFR][1000 genomes];0.91[ASN][1000 genomes]
rs2128275	0.98[AFR][1000 genomes];0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2128277	0.82[ASN][1000 genomes]
rs2404352	0.82[ASN][1000 genomes]
rs2896825	1.00[AFR][1000 genomes];0.96[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs3925535	0.81[AFR][1000 genomes];0.93[ASN][1000 genomes]
rs4625545	0.92[AFR][1000 genomes];0.93[AMR][1000 genomes];0.89[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs4767960	0.81[AFR][1000 genomes];0.91[ASN][1000 genomes]
rs6581504	0.81[AFR][1000 genomes];0.89[ASN][1000 genomes]
rs7139216	0.98[AFR][1000 genomes];0.94[AMR][1000 genomes];0.86[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs716268	0.81[AFR][1000 genomes];0.89[ASN][1000 genomes]
rs7313209	0.92[AFR][1000 genomes];0.94[AMR][1000 genomes];0.86[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7313231	0.97[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7953129	0.86[ASN][1000 genomes]
rs7959498	0.95[AFR][1000 genomes];0.97[AMR][1000 genomes];0.93[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs7970812	0.87[AFR][1000 genomes];0.94[AMR][1000 genomes];0.93[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs9669240	0.81[AFR][1000 genomes];0.89[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
SLC2A13	Distal transcriptional regulation
SLC2A13	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)