SNP Report

Basic Infomation

Name	rs11168613 dbSNP
Location	chr:12,48905034
Allele	C/T

LD-proxy of rSNPs(r²>0.8) (count: 37)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11168583	1.00[YRI][hapmap]
rs11832242	1.00[YRI][hapmap]
rs11834413	1.00[CHB][hapmap]
rs12301009	1.00[YRI][hapmap]
rs12578360	0.85[AMR][1000 genomes];0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs12579133	0.83[AMR][1000 genomes];0.83[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12579547	1.00[CHB][hapmap]
rs12580814	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs12580859	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12581223	0.91[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs12582811	1.00[CHB][hapmap]
rs12582961	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17234937	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs2705127	1.00[JPT][hapmap]
rs4397895	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4426170	0.80[CEU][hapmap];1.00[JPT][hapmap];0.82[EUR][1000 genomes]
rs4547144	0.92[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4554937	0.88[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55983865	0.99[EUR][1000 genomes]
rs56191575	0.85[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs61940764	0.85[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs61940768	0.85[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs61940773	0.85[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs61940774	0.85[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs61940775	0.85[AMR][1000 genomes];0.95[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs61940776	0.85[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs61940777	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61940779	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61940780	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs61940820	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs61940821	1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs61941963	1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61941972	0.82[EUR][1000 genomes]
rs61942813	0.82[EUR][1000 genomes]
rs61942828	0.94[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs61942829	0.97[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs61942830	0.94[EUR][1000 genomes];0.80[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
OR8S1	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)