SNP Report

Basic Infomation

Name	rs61940764 dbSNP
Location	chr:12,48853364
Allele	G/A

LD-proxy of rSNPs(r²>0.8) (count: 31)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11168613	0.85[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs12578360	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12580859	1.00[AFR][1000 genomes];0.85[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs12581223	0.94[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs12582961	0.85[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs17234937	0.97[EUR][1000 genomes]
rs28889727	0.81[AMR][1000 genomes]
rs4397895	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4426170	0.82[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs4547144	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4554937	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs55983865	0.96[EUR][1000 genomes]
rs56191575	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61940768	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61940773	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61940774	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61940775	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61940776	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61940777	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61940779	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61940780	0.91[AMR][1000 genomes];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs61940820	0.87[AFR][1000 genomes];0.85[AMR][1000 genomes];0.97[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs61940821	0.85[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs61941963	0.87[AFR][1000 genomes];0.85[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs61942783	0.87[AFR][1000 genomes]
rs61942784	0.87[AFR][1000 genomes]
rs61942786	0.81[AMR][1000 genomes]
rs61942813	0.82[EUR][1000 genomes]
rs61942828	0.87[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs61942829	0.97[EUR][1000 genomes]
rs61942830	1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.96[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
C12orf54	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)