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rVarBase
SNP Report
Basic Infomation
Name
rs10881776  
dbSNP
Location
chr:10,82331629
Allele
C/T
LD-proxy of rSNPs(r
2
>0.8) (count: 11)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs11186064
0.82[EUR][1000 genomes]
rs11186102
0.98[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11186128
0.94[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11186135
0.96[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11186141
0.92[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12569530
0.87[AMR][1000 genomes]
rs12569542
0.87[AMR][1000 genomes]
rs1573973
0.87[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs34369840
0.85[EUR][1000 genomes]
rs7072583
0.87[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs71483311
0.85[EUR][1000 genomes]
rSNP related genes
Symbol
Regulation type
SH2D4B
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)