SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 9)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11174533	0.83[ASN][1000 genomes]
rs11174536	0.83[ASN][1000 genomes]
rs11564221	0.88[CHB][hapmap];0.94[ASN][1000 genomes]
rs12810368	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.86[LWK][hapmap];0.93[MKK][hapmap];0.97[TSI][hapmap];0.87[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs12827948	1.00[CEU][hapmap];0.88[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.86[LWK][hapmap];0.92[MKK][hapmap];0.97[TSI][hapmap];0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7311756	0.83[ASN][1000 genomes]
rs73280629	0.84[ASN][1000 genomes]
rs7966222	0.81[GIH][hapmap]
rs7976837	1.00[LWK][hapmap];1.00[YRI][hapmap];0.89[AFR][1000 genomes]

rSNP related genes

Symbol	Regulation type
LRRK2	Distal transcriptional regulation
SLC2A13	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 3)