SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 7)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10158536	1.00[GIH][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.82[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs10752614	1.00[GIH][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.82[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs10908487	0.82[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs12080245	1.00[GIH][hapmap];1.00[TSI][hapmap];1.00[ASN][1000 genomes]
rs12138913	0.82[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs1804478	1.00[TSI][hapmap];1.00[ASN][1000 genomes]
rs4661096	1.00[GIH][hapmap];1.00[TSI][hapmap]

rSNP related genes

Symbol	Regulation type
LAMTOR2	Proximal transcriptional regulation
KIAA0907	Distal transcriptional regulation
PMF1-BGLAP	Distal transcriptional regulation
PMF1	Distal transcriptional regulation
SMG5	Distal transcriptional regulation
TMEM79	Distal transcriptional regulation
RIT1	Distal transcriptional regulation
SSR2	Distal transcriptional regulation
LAMTOR2	Distal transcriptional regulation
MEX3A	Distal transcriptional regulation
LMNA	Distal transcriptional regulation
ENSG00000227010	Distal transcriptional regulation
UBQLN4	RNA binding protein mediated regulation

rSNP related regulatory elements

eQTL evidence (count: 1)