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rVarBase
SNP Report
Basic Infomation
Name
rs10450783  
dbSNP
Location
chr:12,48418146
Allele
C/T
LD-proxy of rSNPs(r
2
>0.8) (count: 8)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs11168358
0.91[EUR][1000 genomes]
rs11168360
0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs17122567
0.89[EUR][1000 genomes]
rs2056448
0.88[EUR][1000 genomes]
rs2408954
0.86[EUR][1000 genomes]
rs7134203
0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7134878
0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7135261
0.93[ASN][1000 genomes]
rSNP related genes
Symbol
Regulation type
ENSG00000257955
Distal transcriptional regulation
ASB8
Distal transcriptional regulation
COL2A1
Distal transcriptional regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)