SNP Report

Basic Infomation

Name	rs10035221 dbSNP
Location	chr:5,150280497
Allele	G/A

LD-proxy of rSNPs(r²>0.8) (count: 33)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10041072	0.85[YRI][hapmap];0.85[AFR][1000 genomes]
rs10061956	0.84[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs10067831	0.84[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs10069671	0.84[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs10079642	1.00[CEU][hapmap];0.81[CHB][hapmap];0.95[JPT][hapmap];0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10463310	0.83[YRI][hapmap];0.85[AFR][1000 genomes]
rs11167514	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11167518	0.85[AFR][1000 genomes]
rs11747270	0.85[YRI][hapmap];0.85[AFR][1000 genomes]
rs11949556	1.00[CEU][hapmap];0.85[CHB][hapmap];1.00[JPT][hapmap];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1277603	0.85[CHB][hapmap];0.91[JPT][hapmap];0.91[ASN][1000 genomes]
rs1382322	0.82[JPT][hapmap]
rs1428552	0.80[AFR][1000 genomes]
rs1478392	0.83[JPT][hapmap]
rs1478394	0.81[JPT][hapmap]
rs1531543	0.82[JPT][hapmap]
rs2086120	0.82[JPT][hapmap]
rs2112637	1.00[CEU][hapmap];0.81[CHB][hapmap];0.95[JPT][hapmap];0.85[EUR][1000 genomes]
rs4599525	1.00[CEU][hapmap];0.81[CHB][hapmap];0.95[JPT][hapmap];0.84[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs4958427	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.81[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4958846	0.86[CHB][hapmap];0.96[JPT][hapmap];0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs60134818	0.88[AFR][1000 genomes]
rs6579807	0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6579814	0.82[JPT][hapmap]
rs6579819	0.83[JPT][hapmap]
rs66536655	0.89[AMR][1000 genomes];0.94[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6888072	0.87[AFR][1000 genomes]
rs6888154	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[YRI][hapmap];0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6888206	0.82[AFR][1000 genomes]
rs73284126	0.85[AFR][1000 genomes]
rs7711212	0.82[JPT][hapmap]
rs7724036	0.85[YRI][hapmap]
rs7736885	0.83[JPT][hapmap]

rSNP related genes

Symbol	Regulation type
ZNF300	Distal transcriptional regulation
ZNF300	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)