SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 19)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10035221	0.84[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs10067831	1.00[CEU][hapmap];0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10069671	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10079642	0.91[AFR][1000 genomes];0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10515643	1.00[CEU][hapmap]
rs11167514	0.84[AMR][1000 genomes];0.89[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11949556	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12653571	1.00[CEU][hapmap]
rs12656603	1.00[CEU][hapmap]
rs17800771	1.00[CEU][hapmap]
rs17800777	1.00[CEU][hapmap]
rs1947773	1.00[CEU][hapmap]
rs2112637	0.82[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2290989	1.00[CEU][hapmap]
rs4599525	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4958427	0.85[EUR][1000 genomes]
rs4958846	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs66536655	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs6888154	0.84[AMR][1000 genomes];0.86[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
RPS14	Distal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 0)