SNP Report
Name | rs9673543   dbSNP |
---|---|
Location | chr:16,11384956 |
Allele | A/G |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs1019551 | 0.88[ASN][1000 genomes] |
rs11074957 | 0.90[ASN][1000 genomes] |
rs11640295 | 0.88[ASN][1000 genomes] |
rs11865598 | 0.87[ASN][1000 genomes] |
rs12445900 | 0.88[ASN][1000 genomes] |
rs1559394 | 0.83[ASN][1000 genomes] |
rs1646022 | 0.83[ASN][1000 genomes] |
rs16958199 | 0.81[ASN][1000 genomes] |
rs1794023 | 0.88[ASN][1000 genomes] |
rs2070923 | 0.83[ASN][1000 genomes] |
rs2550475 | 0.83[ASN][1000 genomes] |
rs28567501 | 0.86[ASN][1000 genomes] |
rs28671554 | 0.88[ASN][1000 genomes] |
rs34764020 | 0.86[ASN][1000 genomes] |
rs376374 | 0.87[ASN][1000 genomes] |
rs4238603 | 0.88[ASN][1000 genomes] |
rs4340345 | 0.88[ASN][1000 genomes] |
rs4780359 | 0.87[ASN][1000 genomes] |
rs4781057 | 0.85[ASN][1000 genomes] |
rs4781058 | 0.88[ASN][1000 genomes] |
rs4781059 | 0.85[ASN][1000 genomes] |
rs4781060 | 0.87[ASN][1000 genomes] |
rs4781062 | 0.88[ASN][1000 genomes] |
rs55833546 | 0.89[ASN][1000 genomes] |
rs57125479 | 0.89[ASN][1000 genomes] |
rs60535402 | 0.89[ASN][1000 genomes] |
rs6498179 | 0.88[ASN][1000 genomes] |
rs686774 | 0.84[ASN][1000 genomes] |
rs7205578 | 0.87[ASN][1000 genomes] |
rs7206320 | 0.88[ASN][1000 genomes] |
rs73511456 | 0.88[ASN][1000 genomes] |
rs737008 | 0.84[ASN][1000 genomes] |
rs880341 | 0.80[AMR][1000 genomes];0.88[ASN][1000 genomes] |
rs929879 | 0.85[ASN][1000 genomes] |
rs949429 | 0.84[ASN][1000 genomes] |
rs9922058 | 0.90[ASN][1000 genomes] |
rs9930474 | 0.80[AMR][1000 genomes];0.95[ASN][1000 genomes] |
Symbol | Regulation type |
---|---|
ENSG00000238409 | Proximal transcriptional regulation |
PRM3 | Distal transcriptional regulation |
ENSG00000212228 | Distal transcriptional regulation |
RMI2 | RNA binding protein mediated regulation |
Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL related gene | Source |
---|---|
C16orf75 | Pritchard |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014