SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 13)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs12711516	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4908727	0.93[CHB][hapmap];0.93[JPT][hapmap];0.85[ASN][1000 genomes]
rs6577468	0.95[ASN][1000 genomes]
rs6694154	0.90[AMR][1000 genomes];0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7523227	0.99[ASN][1000 genomes]
rs7523335	0.87[CHB][hapmap];1.00[JPT][hapmap];0.99[ASN][1000 genomes]
rs7539807	0.96[ASN][1000 genomes]
rs7540528	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7550111	0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7551900	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs9434991	0.93[CHB][hapmap];1.00[JPT][hapmap];0.98[ASN][1000 genomes]
rs9434992	0.99[ASN][1000 genomes]
rs9434993	0.99[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
ERRFI1	Distal transcriptional regulation
ENSG00000238290	Distal transcriptional regulation
ENSG00000229305	Distal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 0)