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rVarBase
SNP Report
Basic Infomation
Name
rs12711516  
dbSNP
Location
chr:1,8181227
Allele
G/C
LD-proxy of rSNPs(r
2
>0.8) (count: 13)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs4908727
0.85[ASN][1000 genomes]
rs6577468
0.96[ASN][1000 genomes]
rs6694154
0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7523227
0.98[ASN][1000 genomes]
rs7523335
0.98[ASN][1000 genomes]
rs7539807
0.96[ASN][1000 genomes]
rs7540528
0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7550111
0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7551900
0.90[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs9434991
0.97[ASN][1000 genomes]
rs9434992
0.98[ASN][1000 genomes]
rs9434993
0.98[ASN][1000 genomes]
rs9651154
0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rSNP related genes
Symbol
Regulation type
ERRFI1
Distal transcriptional regulation
ENSG00000238290
Distal transcriptional regulation
ENSG00000229305
Distal transcriptional regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)