SNP Report
Basic Infomation
| Name | rs9465815 dbSNP |
|---|---|
| Location | chr:6,20579761 |
| Allele | A/G |
LD-proxy of rSNPs(r2>0.8) (count: 18)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs10223680 | 1.00[EUR][1000 genomes] |
| rs10223876 | 1.00[EUR][1000 genomes] |
| rs2103682 | 0.81[AFR][1000 genomes] |
| rs28869917 | 1.00[EUR][1000 genomes] |
| rs6928586 | 0.90[YRI][hapmap];0.86[AFR][1000 genomes] |
| rs7744002 | 1.00[EUR][1000 genomes] |
| rs7751682 | 1.00[EUR][1000 genomes] |
| rs7753519 | 0.89[YRI][hapmap];0.87[AFR][1000 genomes] |
| rs7764558 | 1.00[EUR][1000 genomes] |
| rs9460521 | 0.95[YRI][hapmap];0.81[AFR][1000 genomes] |
| rs9460525 | 1.00[EUR][1000 genomes] |
| rs9460526 | 1.00[EUR][1000 genomes] |
| rs9460530 | 1.00[EUR][1000 genomes] |
| rs9465810 | 1.00[EUR][1000 genomes] |
| rs9465812 | 1.00[EUR][1000 genomes] |
| rs9465817 | 1.00[EUR][1000 genomes] |
| rs9465828 | 1.00[EUR][1000 genomes] |
| rs9465829 | 1.00[EUR][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| E2F3 | Distal transcriptional regulation |
| CDKAL1 | RNA binding protein mediated regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014