SNP Report

Basic Infomation

Name	rs9348456 dbSNP
Location	chr:6,21143366
Allele	C/A

LD-proxy of rSNPs(r²>0.8) (count: 35)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10946431	0.85[ASN][1000 genomes]
rs10946432	0.80[CHB][hapmap];0.94[JPT][hapmap];0.81[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs10946433	0.80[CHB][hapmap];0.83[CHD][hapmap];0.94[GIH][hapmap];0.94[JPT][hapmap];0.81[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs16884591	0.80[CHB][hapmap];0.94[GIH][hapmap];0.94[JPT][hapmap];0.84[ASN][1000 genomes]
rs2168985	0.83[ASN][1000 genomes]
rs34689265	0.81[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs4527692	0.84[JPT][hapmap]
rs6456400	0.83[ASN][1000 genomes]
rs6901380	0.89[JPT][hapmap];0.83[ASN][1000 genomes]
rs6906201	0.83[ASN][1000 genomes]
rs6913868	0.83[ASN][1000 genomes]
rs6916577	0.87[JPT][hapmap];0.83[ASN][1000 genomes]
rs6931316	0.89[JPT][hapmap];0.83[ASN][1000 genomes]
rs6937555	0.89[JPT][hapmap];0.83[ASN][1000 genomes]
rs7739578	0.89[JPT][hapmap]
rs7739596	0.89[JPT][hapmap];0.80[ASN][1000 genomes]
rs7752602	0.89[JPT][hapmap];0.84[ASN][1000 genomes]
rs7752788	0.87[JPT][hapmap];0.83[ASN][1000 genomes]
rs9295496	0.89[JPT][hapmap];0.87[ASN][1000 genomes]
rs9295497	0.80[CHB][hapmap];0.94[JPT][hapmap];0.81[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9348457	0.89[JPT][hapmap];0.83[ASN][1000 genomes]
rs9350323	0.89[JPT][hapmap];0.83[ASN][1000 genomes]
rs9350324	0.93[JPT][hapmap];0.81[ASN][1000 genomes]
rs9350325	0.83[ASN][1000 genomes]
rs9356768	0.80[CHB][hapmap];0.83[CHD][hapmap];0.94[GIH][hapmap];0.94[JPT][hapmap];0.85[ASN][1000 genomes]
rs9356769	0.83[ASN][1000 genomes]
rs9358395	0.88[JPT][hapmap];0.83[ASN][1000 genomes]
rs9366381	0.81[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs9366382	0.83[ASN][1000 genomes]
rs9366383	0.88[JPT][hapmap];0.83[ASN][1000 genomes]
rs9366384	0.83[ASN][1000 genomes]
rs9368280	0.87[CHB][hapmap];0.94[JPT][hapmap];0.89[ASN][1000 genomes]
rs9368281	0.87[ASN][1000 genomes]
rs9368282	0.80[ASN][1000 genomes]
rs9368283	0.88[JPT][hapmap];0.83[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
CDKAL1	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 1)