SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 16)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10098865	1.00[YRI][hapmap];0.90[AFR][1000 genomes]
rs12676771	1.00[YRI][hapmap];0.90[AFR][1000 genomes]
rs1551397	1.00[CEU][hapmap];0.90[CHB][hapmap];0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs1551398	0.91[CEU][hapmap];0.90[CHB][hapmap];0.92[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs1551399	0.88[CEU][hapmap];0.90[CHB][hapmap];0.89[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs1551400	1.00[CEU][hapmap];0.90[CHB][hapmap];1.00[YRI][hapmap];0.99[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs28510097	0.92[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs4380956	0.87[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap]
rs4871611	0.91[CEU][hapmap];0.90[CHB][hapmap];0.92[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs55867617	0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7002027	0.86[CHB][hapmap];0.95[JPT][hapmap]
rs7005585	0.90[CHB][hapmap];0.95[JPT][hapmap]
rs7005992	0.85[CHB][hapmap];0.95[JPT][hapmap]
rs7818434	0.85[CHB][hapmap]
rs7824301	0.80[YRI][hapmap]
rs921720	0.91[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
ENSG00000253111	Proximal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 0)