SNP Report
Basic Infomation
| Name | rs7824301 dbSNP |
|---|---|
| Location | chr:8,126539437 |
| Allele | A/G |
LD-proxy of rSNPs(r2>0.8) (count: 11)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs10098865 | 0.80[YRI][hapmap] |
| rs12676771 | 0.80[YRI][hapmap] |
| rs1551400 | 0.80[YRI][hapmap] |
| rs17420217 | 1.00[CEU][hapmap];0.93[EUR][1000 genomes] |
| rs72645160 | 0.93[EUR][1000 genomes] |
| rs72645162 | 0.93[EUR][1000 genomes] |
| rs73349018 | 0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs73349020 | 1.00[EUR][1000 genomes] |
| rs7824310 | 0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs7835068 | 0.81[ASW][hapmap];0.89[YRI][hapmap];0.84[AFR][1000 genomes] |
| rs921721 | 0.80[YRI][hapmap] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| TRIB1 | Distal transcriptional regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 6)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014