SNP Report
Name | rs921720   dbSNP |
---|---|
Location | chr:8,126534671 |
Allele | A/G |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs1551397 | 0.88[CEU][hapmap];0.85[CHB][hapmap];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.80[ASN][1000 genomes] |
rs1551398 | 1.00[ASW][hapmap];1.00[CEU][hapmap];0.85[CHB][hapmap];0.98[GIH][hapmap];0.88[LWK][hapmap];0.87[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.80[ASN][1000 genomes] |
rs1551399 | 0.96[CEU][hapmap];0.85[CHB][hapmap];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.80[ASN][1000 genomes] |
rs1551400 | 0.88[CEU][hapmap];0.85[CHB][hapmap];0.92[EUR][1000 genomes];0.80[ASN][1000 genomes] |
rs28510097 | 1.00[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.80[ASN][1000 genomes] |
rs4380956 | 0.80[ASW][hapmap];0.96[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.98[TSI][hapmap] |
rs4871611 | 1.00[ASW][hapmap];1.00[CEU][hapmap];0.85[CHB][hapmap];0.98[GIH][hapmap];0.88[LWK][hapmap];0.83[MEX][hapmap];0.96[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.80[ASN][1000 genomes] |
rs55867617 | 0.98[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs7002027 | 0.90[CHB][hapmap];0.88[CHD][hapmap];0.95[JPT][hapmap] |
rs7005585 | 0.85[CHB][hapmap];0.88[CHD][hapmap];0.95[JPT][hapmap] |
rs7005992 | 0.89[CHB][hapmap];0.95[JPT][hapmap] |
rs7818434 | 0.80[CHB][hapmap] |
rs921721 | 0.91[CEU][hapmap];0.95[CHB][hapmap];1.00[JPT][hapmap];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes] |
Symbol | Regulation type |
---|---|
ENSG00000253111 | Proximal transcriptional regulation |
Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL related gene | Source |
---|---|
KIAA0196 | SCAN |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014