SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 12)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10791815	1.00[CEU][hapmap]
rs11227153	1.00[CEU][hapmap]
rs11227154	1.00[CEU][hapmap]
rs12789598	1.00[CEU][hapmap]
rs12794623	0.94[AMR][1000 genomes];0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2271446	1.00[CEU][hapmap]
rs2271449	1.00[CEU][hapmap]
rs481574	1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs525141	1.00[CHB][hapmap];0.93[JPT][hapmap];0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs675671	1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[AMR][1000 genomes];0.80[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs677740	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs71462337	0.94[AMR][1000 genomes];0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
CDC42EP2	Distal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 0)