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rVarBase
SNP Report
Basic Infomation
Name
rs840971  
dbSNP
Location
chr:2,65704213
Allele
A/C
LD-proxy of rSNPs(r
2
>0.8) (count: 6)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs2860779
0.84[ASN][1000 genomes]
rs840967
0.80[AFR][1000 genomes];0.99[ASN][1000 genomes]
rs840969
1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs840972
1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs840975
1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs865768
1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.99[ASN][1000 genomes]
rSNP related genes
Symbol
Regulation type
ENSG00000204929
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)