SNP Report

Basic Infomation

Name	rs822488 dbSNP
Location	chr:1,155821774
Allele	G/A

LD-proxy of rSNPs(r²>0.8) (count: 21)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11803678	0.85[AMR][1000 genomes]
rs1624846	0.81[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs1749415	0.85[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs2363012	0.96[AFR][1000 genomes];0.95[AMR][1000 genomes]
rs2477541	0.80[AMR][1000 genomes]
rs2686255	0.81[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs4253908	0.80[AMR][1000 genomes]
rs59706606	0.85[AMR][1000 genomes]
rs6684460	0.86[AMR][1000 genomes]
rs682020	0.85[AMR][1000 genomes]
rs708612	0.80[AMR][1000 genomes]
rs7530726	0.95[AFR][1000 genomes];0.95[AMR][1000 genomes]
rs822018	0.83[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs822020	0.80[AMR][1000 genomes]
rs822022	0.81[AFR][1000 genomes];0.85[AMR][1000 genomes]
rs822482	0.94[AFR][1000 genomes];0.95[AMR][1000 genomes]
rs822489	0.81[AFR][1000 genomes]
rs822495	0.95[AFR][1000 genomes];0.95[AMR][1000 genomes]
rs822497	0.82[AMR][1000 genomes]
rs822499	0.95[AFR][1000 genomes];0.95[AMR][1000 genomes]
rs822500	0.95[AFR][1000 genomes];0.95[AMR][1000 genomes]

rSNP related genes

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)