SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 10)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11821768	1.00[MEX][hapmap]
rs17156025	1.00[MEX][hapmap]
rs198738	1.00[CHD][hapmap];1.00[MEX][hapmap];1.00[AMR][1000 genomes]
rs198758	1.00[CHD][hapmap]
rs198761	1.00[CHD][hapmap];1.00[MEX][hapmap];1.00[AMR][1000 genomes]
rs2008212	1.00[ASW][hapmap];1.00[CHD][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.90[MKK][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7110530	1.00[MEX][hapmap]
rs73603	1.00[CHD][hapmap]
rs887646	1.00[CHD][hapmap]
rs896830	1.00[MEX][hapmap]

rSNP related genes

Symbol	Regulation type
ENSG00000188825	Distal transcriptional regulation
LINC00854	Distal transcriptional regulation
WDR74	Distal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 1)