SNP Report

Basic Infomation

Name	rs73603 dbSNP
Location	chr:11,61355212
Allele	A/G

LD-proxy of rSNPs(r²>0.8) (count: 21)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11230738	1.00[CEU][hapmap];1.00[TSI][hapmap];1.00[ASN][1000 genomes]
rs11230742	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11230743	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11230745	1.00[CEU][hapmap];1.00[TSI][hapmap];0.81[EUR][1000 genomes]
rs11820517	1.00[TSI][hapmap];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11826678	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12278804	1.00[CEU][hapmap]
rs12282853	1.00[CEU][hapmap];1.00[TSI][hapmap];0.81[EUR][1000 genomes]
rs198738	1.00[CHD][hapmap]
rs198758	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.96[YRI][hapmap];0.94[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs198759	0.83[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs198760	1.00[CEU][hapmap];0.96[YRI][hapmap];0.94[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs198761	1.00[CHD][hapmap]
rs2008212	1.00[CHD][hapmap]
rs57347248	0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs57825249	1.00[ASN][1000 genomes]
rs60449976	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7929235	1.00[CHD][hapmap]
rs82969	1.00[CEU][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs887646	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.93[YRI][hapmap];0.82[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs887647	1.00[CEU][hapmap];0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
ENSG00000250230	Proximal transcriptional regulation
SYT7	Distal transcriptional regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)