SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 24)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs11815736	1.00[YRI][hapmap];0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11817277	1.00[EUR][1000 genomes]
rs11819282	0.85[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs12267150	1.00[EUR][1000 genomes]
rs1578672	1.00[EUR][1000 genomes]
rs17107514	1.00[AMR][1000 genomes]
rs1889894	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs34662862	0.96[AFR][1000 genomes]
rs56057066	1.00[EUR][1000 genomes]
rs59489651	1.00[EUR][1000 genomes]
rs61274524	1.00[EUR][1000 genomes]
rs61451715	1.00[EUR][1000 genomes]
rs6583818	1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7067733	0.94[YRI][hapmap];0.87[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs7073957	0.83[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs7098638	1.00[EUR][1000 genomes]
rs7100035	1.00[EUR][1000 genomes]
rs7100357	1.00[EUR][1000 genomes]
rs7896688	1.00[YRI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7898027	0.90[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs7910569	1.00[YRI][hapmap];0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7911751	1.00[EUR][1000 genomes]
rs7914114	1.00[EUR][1000 genomes]
rs7915349	1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

rSNP related genes

Symbol	Regulation type
IDE	Proximal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 0)