SNP Report
Basic Infomation
| Name | rs59489651 dbSNP |
|---|---|
| Location | chr:10,94461859 |
| Allele | A/G |
LD-proxy of rSNPs(r2>0.8) (count: 22)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs11815736 | 1.00[EUR][1000 genomes] |
| rs11817277 | 1.00[EUR][1000 genomes] |
| rs11819282 | 1.00[EUR][1000 genomes] |
| rs1578672 | 1.00[EUR][1000 genomes] |
| rs1889894 | 1.00[EUR][1000 genomes] |
| rs56057066 | 0.84[AFR][1000 genomes];0.83[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs61274524 | 0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs61451715 | 0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs6583818 | 1.00[EUR][1000 genomes] |
| rs7067733 | 1.00[EUR][1000 genomes] |
| rs7073957 | 1.00[EUR][1000 genomes] |
| rs7098638 | 1.00[EUR][1000 genomes] |
| rs7100035 | 0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs7100357 | 0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs73311751 | 1.00[EUR][1000 genomes] |
| rs73311753 | 1.00[EUR][1000 genomes] |
| rs74149108 | 0.94[AFR][1000 genomes];1.00[AMR][1000 genomes] |
| rs7898027 | 1.00[EUR][1000 genomes] |
| rs7910569 | 1.00[EUR][1000 genomes] |
| rs7914114 | 1.00[EUR][1000 genomes] |
| rs7915349 | 1.00[EUR][1000 genomes] |
| rs7917817 | 1.00[EUR][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| ENSG00000201412 | Distal transcriptional regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014