SNP Report

Basic Infomation

Name	rs7600961 dbSNP
Location	chr:2,103035455
Allele	G/A

LD-proxy of rSNPs(r²>0.8) (count: 26)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10515921	0.87[CEU][hapmap];1.00[GIH][hapmap]
rs11465596	0.93[CEU][hapmap]
rs11465670	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11465698	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1403549	0.93[CEU][hapmap]
rs17027173	0.83[ASW][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];0.90[GIH][hapmap];1.00[JPT][hapmap];0.84[LWK][hapmap];0.89[MKK][hapmap];1.00[ASN][1000 genomes]
rs17027327	0.93[CEU][hapmap]
rs17027341	0.93[CEU][hapmap]
rs17027421	0.93[CEU][hapmap]
rs17639215	0.82[CEU][hapmap]
rs1880000	0.93[CEU][hapmap]
rs3752659	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3771167	0.85[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs6543135	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs6719130	0.82[CEU][hapmap];1.00[JPT][hapmap]
rs6728945	0.85[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs6749440	0.93[CEU][hapmap]
rs6759588	1.00[CEU][hapmap];0.97[EUR][1000 genomes]
rs7558013	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs7575867	0.93[CEU][hapmap]
rs7583683	0.93[CEU][hapmap]
rs7587856	0.93[CEU][hapmap]
rs7593444	0.93[CEU][hapmap]
rs7601773	0.93[CEU][hapmap]
rs9677607	0.93[CEU][hapmap]
rs985523	0.82[CEU][hapmap];1.00[JPT][hapmap]

rSNP related genes

Symbol	Regulation type
IL18RAP	Proximal transcriptional regulation
IL18RAP	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)