SNP Report

Basic Infomation

Name	rs7586345 dbSNP
Location	chr:2,65247883
Allele	A/G

LD-proxy of rSNPs(r²>0.8) (count: 20)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs10197339	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10209552	1.00[CEU][hapmap];0.90[YRI][hapmap];0.85[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs1058922	1.00[CEU][hapmap];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1058926	1.00[CEU][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17029736	1.00[ASN][1000 genomes]
rs17029771	1.00[CEU][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2540955	0.90[CEU][hapmap];0.91[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2540956	0.91[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2540966	0.91[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2540967	0.91[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2540969	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2723071	0.91[CEU][hapmap];1.00[ASN][1000 genomes]
rs2723074	0.91[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2723076	0.91[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs2723078	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62140372	1.00[ASN][1000 genomes]
rs62140373	0.92[EUR][1000 genomes]
rs72886524	0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7563131	1.00[CEU][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7850	1.00[CEU][hapmap];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

rSNP related genes

Symbol	Regulation type
SLC1A4	Distal transcriptional regulation
SLC1A4	RNA binding protein mediated regulation

rSNP related regulatory elements

Proximal transcriptional regulation

Distal transcriptional regulation

Post-transcriptional regulation:within mature miRNA

Post-transcriptional regulation: associated with RNA binding protein

eQTL evidence (count: 0)