SNP Report
Name | rs2540956   dbSNP |
---|---|
Location | chr:2,65268944 |
Allele | G/C |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
rs_ID | r2[population][source] |
---|---|
rs10197339 | 1.00[ASN][1000 genomes] |
rs10209552 | 0.84[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs1058922 | 0.98[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs1058926 | 0.91[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs17029736 | 1.00[ASN][1000 genomes] |
rs17029771 | 0.91[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs2540952 | 0.95[EUR][1000 genomes] |
rs2540955 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2540966 | 1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2540967 | 1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2540969 | 0.91[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs2723071 | 1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2723074 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2723076 | 1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs2723078 | 0.98[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs62140372 | 1.00[ASN][1000 genomes] |
rs72886524 | 0.98[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs7563131 | 0.91[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs7586345 | 0.91[AMR][1000 genomes];1.00[ASN][1000 genomes] |
rs7850 | 0.98[AMR][1000 genomes];1.00[ASN][1000 genomes] |
Symbol | Regulation type |
---|---|
ENSG00000232613 | Proximal transcriptional regulation |
CEP68 | Distal transcriptional regulation |
RAB1A | Distal transcriptional regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014