SNP Report
Basic Infomation
| Name | rs7562706 dbSNP |
|---|---|
| Location | chr:2,102810899 |
| Allele | G/T |
LD-proxy of rSNPs(r2>0.8) (count: 17)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs13413002 | 1.00[CEU][hapmap] |
| rs13428595 | 1.00[CEU][hapmap] |
| rs1922292 | 0.83[YRI][hapmap] |
| rs2230400 | 1.00[CEU][hapmap] |
| rs28385682 | 1.00[CEU][hapmap] |
| rs3917226 | 1.00[CEU][hapmap] |
| rs3917236 | 1.00[CEU][hapmap] |
| rs3917271 | 1.00[CEU][hapmap] |
| rs3917312 | 1.00[CEU][hapmap] |
| rs3917327 | 1.00[CEU][hapmap] |
| rs4851524 | 1.00[CEU][hapmap] |
| rs6713939 | 1.00[CEU][hapmap] |
| rs6730496 | 1.00[CEU][hapmap] |
| rs6759556 | 1.00[CEU][hapmap] |
| rs7570468 | 1.00[CEU][hapmap] |
| rs7596051 | 1.00[CEU][hapmap] |
| rs7606834 | 1.00[CEU][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| IL1RL2 | RNA binding protein mediated regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014