SNP Report

Basic Infomation

LD-proxy of rSNPs(r²>0.8) (count: 26)

The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r² >=0.8.

rs_ID	r²[population][source]
rs13413002	1.00[CEU][hapmap]
rs13428595	1.00[CEU][hapmap]
rs2230400	1.00[CEU][hapmap]
rs28385682	1.00[CEU][hapmap]
rs35911664	0.81[AFR][1000 genomes]
rs3917226	1.00[CEU][hapmap];0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs3917236	1.00[CEU][hapmap]
rs3917271	1.00[CEU][hapmap];0.84[YRI][hapmap];0.81[AFR][1000 genomes]
rs3917284	0.81[AFR][1000 genomes]
rs3917312	1.00[CEU][hapmap];0.93[YRI][hapmap];0.85[AFR][1000 genomes]
rs3917327	1.00[CEU][hapmap];0.81[AFR][1000 genomes]
rs4851524	1.00[CEU][hapmap]
rs58082372	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs59928428	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6713939	1.00[CEU][hapmap]
rs6730496	1.00[CEU][hapmap]
rs6758647	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73943985	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73943987	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73943989	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73943994	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73943995	0.82[AFR][1000 genomes]
rs7562706	1.00[CEU][hapmap]
rs7570468	1.00[CEU][hapmap]
rs7596051	1.00[CEU][hapmap]
rs7606834	1.00[CEU][hapmap]

rSNP related genes

Symbol	Regulation type
IL1R1	Distal transcriptional regulation

rSNP related regulatory elements

eQTL evidence (count: 0)