SNP Report
Basic Infomation
| Name | rs7546746 dbSNP |
|---|---|
| Location | chr:1,155082527 |
| Allele | A/G |
LD-proxy of rSNPs(r2>0.8) (count: 17)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs10796938 | 0.89[AMR][1000 genomes];0.90[EUR][1000 genomes] |
| rs11264312 | 0.89[AMR][1000 genomes];0.92[EUR][1000 genomes] |
| rs11264313 | 0.85[AMR][1000 genomes];0.91[EUR][1000 genomes] |
| rs11264314 | 0.82[AFR][1000 genomes];0.89[AMR][1000 genomes];0.92[EUR][1000 genomes] |
| rs11264318 | 0.83[AMR][1000 genomes];0.91[EUR][1000 genomes] |
| rs11264319 | 0.87[AMR][1000 genomes];0.93[EUR][1000 genomes] |
| rs11581730 | 0.90[AFR][1000 genomes];0.89[AMR][1000 genomes];0.91[EUR][1000 genomes] |
| rs11583762 | 0.92[AMR][1000 genomes];0.89[EUR][1000 genomes] |
| rs4625273 | 0.89[AMR][1000 genomes];0.92[EUR][1000 genomes] |
| rs56112907 | 0.87[AMR][1000 genomes];0.90[EUR][1000 genomes] |
| rs6427158 | 0.89[AMR][1000 genomes];0.91[EUR][1000 genomes] |
| rs6693477 | 0.87[AMR][1000 genomes];0.93[EUR][1000 genomes] |
| rs7364869 | 0.87[AMR][1000 genomes];0.91[EUR][1000 genomes] |
| rs7365544 | 0.87[AMR][1000 genomes];0.90[EUR][1000 genomes] |
| rs7366355 | 0.85[AFR][1000 genomes];0.89[AMR][1000 genomes];0.92[EUR][1000 genomes] |
| rs7368345 | 0.91[AFR][1000 genomes];0.89[AMR][1000 genomes];0.93[EUR][1000 genomes] |
| rs7548955 | 0.91[AFR][1000 genomes];0.89[AMR][1000 genomes];0.93[EUR][1000 genomes] |
rSNP related genes
| Symbol | Regulation type |
|---|---|
| ADAM15 | Distal transcriptional regulation |
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014