SNP Report
| Name | rs11583762   dbSNP |
|---|---|
| Location | chr:1,155085270 |
| Allele | A/G |
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r2 >=0.8.
| rs_ID | r2[population][source] |
|---|---|
| rs10796938 | 0.86[AMR][1000 genomes];0.88[EUR][1000 genomes] |
| rs11264312 | 0.86[AMR][1000 genomes];0.89[EUR][1000 genomes] |
| rs11264313 | 0.82[AMR][1000 genomes];0.89[EUR][1000 genomes] |
| rs11264314 | 0.86[AMR][1000 genomes];0.90[EUR][1000 genomes] |
| rs11264318 | 0.82[AMR][1000 genomes];0.87[EUR][1000 genomes] |
| rs11264319 | 0.84[AMR][1000 genomes];0.91[EUR][1000 genomes] |
| rs11264323 | 0.82[ASN][1000 genomes] |
| rs11581730 | 0.86[AMR][1000 genomes];0.89[EUR][1000 genomes] |
| rs4625273 | 0.86[AMR][1000 genomes];0.89[EUR][1000 genomes] |
| rs56112907 | 0.84[AMR][1000 genomes];0.88[EUR][1000 genomes] |
| rs6427158 | 0.86[AMR][1000 genomes];0.89[EUR][1000 genomes] |
| rs6693477 | 0.84[AMR][1000 genomes];0.91[EUR][1000 genomes] |
| rs7364869 | 0.84[AMR][1000 genomes];0.92[EUR][1000 genomes] |
| rs7365544 | 0.84[AMR][1000 genomes];0.88[EUR][1000 genomes] |
| rs7366355 | 0.86[AMR][1000 genomes];0.89[EUR][1000 genomes] |
| rs7368345 | 0.86[AMR][1000 genomes];0.91[EUR][1000 genomes] |
| rs7546746 | 0.92[AMR][1000 genomes];0.89[EUR][1000 genomes] |
| rs7548955 | 0.86[AMR][1000 genomes];0.91[EUR][1000 genomes] |
| Symbol | Regulation type |
|---|---|
| KRTCAP2 | Distal transcriptional regulation |
| TRIM46 | Distal transcriptional regulation |
Copyright: Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences Feedback
Last update: March 26, 2014




