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rVarBase
SNP Report
Basic Infomation
Name
rs747854  
dbSNP
Location
chr:14,69233836
Allele
G/A
LD-proxy of rSNPs(r
2
>0.8) (count: 8)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs11158762
0.80[JPT][hapmap]
rs194756
0.85[CHD][hapmap]
rs2236262
0.83[GIH][hapmap]
rs3825568
0.83[GIH][hapmap]
rs4899257
0.90[EUR][1000 genomes]
rs4902647
0.83[GIH][hapmap]
rs52701
0.85[CHD][hapmap]
rs8005236
0.85[JPT][hapmap];0.83[ASN][1000 genomes]
rSNP related genes
Symbol
Regulation type
ZFP36L1
Distal transcriptional regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 2)
eQTL related gene
Source
TOM1L1
SCAN
AKAP5
SCAN