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rVarBase
SNP Report
Basic Infomation
Name
rs7394502  
dbSNP
Location
chr:11,61141476
Allele
G/A
LD-proxy of rSNPs(r
2
>0.8) (count: 12)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs10897155
0.97[AFR][1000 genomes];0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1108769
0.85[EUR][1000 genomes]
rs11230658
0.85[EUR][1000 genomes]
rs11230678
0.97[AFR][1000 genomes];0.81[AMR][1000 genomes]
rs12275843
0.85[EUR][1000 genomes]
rs12286866
0.85[EUR][1000 genomes]
rs1377458
0.97[AFR][1000 genomes];0.81[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs2260655
0.85[EUR][1000 genomes]
rs2305465
0.85[EUR][1000 genomes]
rs7107608
0.85[EUR][1000 genomes]
rs73490303
0.85[EUR][1000 genomes]
rs9704187
0.85[EUR][1000 genomes]
rSNP related genes
Symbol
Regulation type
TMEM138
Distal transcriptional regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)