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rVarBase
SNP Report
Basic Infomation
Name
rs73936439  
dbSNP
Location
chr:2,65459969
Allele
T/G
LD-proxy of rSNPs(r
2
>0.8) (count: 12)
The LD data used here is based on HapMap rel#27 and 1000 Genomes phase I data. LD SNP pairs were selected with a threshold r
2
>=0.8.
rs_ID
r
2
[population][source]
rs11890509
1.00[AMR][1000 genomes]
rs17030025
1.00[AMR][1000 genomes]
rs35295972
0.84[AFR][1000 genomes]
rs55718083
0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs57850847
0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58000136
1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs60410411
0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6720162
1.00[AMR][1000 genomes]
rs73936434
0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73936438
1.00[AMR][1000 genomes]
rs7568071
0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7603729
0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rSNP related genes
Symbol
Regulation type
ENSG00000204929
Distal transcriptional regulation
ACTR2
RNA binding protein mediated regulation
rSNP related regulatory elements
Proximal transcriptional regulation
Distal transcriptional regulation
Post-transcriptional regulation:within mature miRNA
Post-transcriptional regulation: associated with RNA binding protein
eQTL evidence (count: 0)